SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:32025-05-14 08:51:10

description

ABC transporter (hydrophobic protein, probably channel protein)

[SW|ABC transporter] (hydrophobic protein, probably channel protein)

locus

BSU30440

BSU_30440

geneLength

984

987

product

ABC transporter (hydrophobic protein, probably channel protein)

[SW|ABC transporter] (hydrophobic protein, probably channel protein)

ec

outlinks

bsu

BSU30440

BSU_30440

Gene

Coordinates

3,116,996 → 3,117,982

3,116,996 3,117,982

The protein

Protein family

ABC-5 integral membrane protein family (according to Swiss-Prot)

ABC-5 integral membrane protein family (with [[protein|YtrD]], according to UniProt)

The protein

Paralogous protein(s)

[[protein|YtrD]]

[[this]]

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Biological materials

Mutant

MGNA-B539 (ytrC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1538 NBRP B. subtilis, Japan]

GP3189 (Δ[[gene|ytrC]]), available in [SW|Jörg Stülke]'s lab

GP2646 Δ([[gene|ytrG]]-[[gene|ytrA]]-[[gene|ytrB]]-[[gene|ytrC]]-[[gene|ytrD]]-[[gene|ytrE]]-[[gene|ytrF]])::''ermC'', available in [SW|Jörg Stülke]'s lab

MGNA-B539 (ytrC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1538 NBRP B. subtilis, Japan]

BKE30440 ([[gene|ytrC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30440 BGSC] and in [SW|Jörg Stülke]'s lab, [Pubmed|28189581], upstream reverse: _UP1_CTCTCGATAGAGGAGACCTC, downstream forward: _UP4_TAAGAAATGCCTTAGGTTTG

BKK30440 ([[gene|ytrC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30440 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTCTCGATAGAGGAGACCTC, downstream forward: _UP4_TAAGAAATGCCTTAGGTTTG